Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807125.1_cds_XP_016494689.1_9078
CDS Infomation

[gene=LOC107813887] [db_xref=GeneID:107813887] [protein=uncharacterized protein LOC107813887] [protein_id=XP_016494689.1] [location=join(47551..48756,50903..51306,51418..51478,51571..52113)] [gbkey=CDS]
Sequence

ATGAGCGACCAAACGTCTGAATTTCATGTAGCACAACAAAGCAGGAGAGAAAGGTTGAGG
TTTAATTCGGAGCAAGGAATTCAACCATATCAATATGGAAATATATCTTATGATCCATCT
GTATTGTCAACTGAAATGTTTAATTTCGGTACAAGCACGGAACCTGTTGTAGTGTCAAAT
AAGGATACTATGATGATGCATAATCTAGAGTTGCGAGCTGCTAGTGATCGGCTTGATCAT
AGAGTTAGTCATGATGTTACACAAAATTGTAGCAATTGGAAAAGCGTTGATTTGCAACAG
ACCGGTAATTGTAATTGGAATAATGTTGGAAATTATTCAAGTGGTTCTGGAGTTGTTATT
GAAAGCAATTTAAGTACTCCAATGTTTGTAGAGGATCAAGGTTTATCGGGATCATTGAAT
TTGAATAATGTTTCTACCATTGATGTGAAGCCCAATTTTTTCGATTATCAAGAAATTCAG
CACTCTCCCATGACTAATTCGTCGAGTAATATGCAATTTAGTTCCACTTCAGTACTTTAC
CATGACACTCTTCAAGAAGTTGTTACTTCAGCTACTGTTGGAACCCAAGGTGTAGAAATG
GTTGGTCGTGGTTCTTGGACGGAGAGCGGGAATGAACTTCTTTTGCTTCCAAATTATGTT
GATCATTCTCGCCCGTTACACGTGAAAAACTCTTCTGACTTAGTAAGCAGGCCGGTTGAG
AGATGTCATCAATGGATTAGTTGTGAATTGGGTACAAATGTGAGCACAAATAGTACTGCT
CCTGATAATTCTAACGCTCAGGCGTTAGCTCTTTCGCTCTCGCCGGTTCCAACATCAAAA
ACAAATATGGTACAGATGGAAAAAAGAAATCCATTATCTGAGAATTTTGCAATTGCACAT
CGGAGTGCAGTGCCACTTGGTCCTTTCACTGGTTATGCAACTATACTGAAAAGCTCAAAG
TTTCTAAGGCCGGCGCAACAATTGATGGATGAACTTTGCAATCTTGCAGCTGGATCAAAC
GCCGTTAAAAGTTGCATTTTCTCGAAGAAAGTTCGTGAGGGTGGTGTTAGGGTTTCTTGT
GATGGTAATGCTGCTGAGTCTTCATCAGGAGCCATTGTCGGAGATTCGGGTGGCTCATCA
GCCGAATCCAATGGCCGGCCTGATTATTTGCAAAAGAAGGCGAAGCTAATATATATGCAG
GATGAGATTTGTAGAAGATATAAACAGTATCATCAGCAAATGCAAATGGTGGTCTCATCC
TTTGAAACTGTGGCTGGGCTTAGTGCAGCGACCCCTTACATTTCCTTAGCTCTCAAATCG
ATCTCGCAACATTTTAGATCACTGAGGAATTCCATCTCGGATAACCTAAAGAATATAAGG
CAAGCATTAGGTGAAGATTTGCCTTCCCCTGCAACAACTGGCATGAGCAAAGGTGATGGA
ACTTCATCGAAGATGAAATTCATTGACCAGAACTTACATAAGCAGAAAGCTGGTGGAGCC
GGGGTGGCCTTTTTTGAATCCCAGCAACATGTCTGGAGGCCCCAACGAGGCTTACCCGAG
CGTGCTGTGGCTATTCTTAGAGCTTGGCTTTTCGACCACTTCCTTCACCCGTATCCTACT
GATAGTGATAAACACATGTTGGCCACTCAGACTGGCCTAACTAGAAACCAGGTTTCTAAT
TGGTTCATTAATGCACGTGTTCGTGTCTGGAAACCAATGGTTGAAGAAATTCATACACTG
GAGACTAAAGGATTGGGAGATCAAACCGGTTCTAGTATCAGAAGATCAGAGGGGAAGCTC
GTGACAGAACGACCAAACCAAGTAAATGATGGATTGCATAGAAGTAGCATCAGCATTTCA
AATTGTGGCCAACACTTCAATGTGCTCAACATGAGTGGCATGTCAGAGAAGCAAGATGAC
TGCCCAGGGATCGGTCCCTCGGAACGATTAGACGAAGATATGTTGTGGAAGAATCAAGAA
AAGCGGTCAAGGTTAGAGTGTCACATTCCTGCTAGCATGGACGGTTCGTTAATGGGGTTT
GTACCTTACCAGAGAAATGGACTTGAAATCGGTGGTATAGGAGCTGTGTCGTTGACATTG
GGTCTAAGGCAAAATGCTGAGGCTGCACAACAACAGCAACAGTTGCAGCAACTACACGAA
CATCGACTCAGACAGCAGTTTGGAGGTCAGATGATTCATGACTTTGTAGATTGA

Peptide Sequence

PEP ID

XP_016494689.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107813887 [Nicotiana tabacum]
Sequence

MSDQTSEFHVAQQSRRERLRFNSEQGIQPYQYGNISYDPSVLSTEMFNFGTSTEPVVVSN
KDTMMMHNLELRAASDRLDHRVSHDVTQNCSNWKSVDLQQTGNCNWNNVGNYSSGSGVVI
ESNLSTPMFVEDQGLSGSLNLNNVSTIDVKPNFFDYQEIQHSPMTNSSSNMQFSSTSVLY
HDTLQEVVTSATVGTQGVEMVGRGSWTESGNELLLLPNYVDHSRPLHVKNSSDLVSRPVE
RCHQWISCELGTNVSTNSTAPDNSNAQALALSLSPVPTSKTNMVQMEKRNPLSENFAIAH
RSAVPLGPFTGYATILKSSKFLRPAQQLMDELCNLAAGSNAVKSCIFSKKVREGGVRVSC
DGNAAESSSGAIVGDSGGSSAESNGRPDYLQKKAKLIYMQDEICRRYKQYHQQMQMVVSS
FETVAGLSAATPYISLALKSISQHFRSLRNSISDNLKNIRQALGEDLPSPATTGMSKGDG
TSSKMKFIDQNLHKQKAGGAGVAFFESQQHVWRPQRGLPERAVAILRAWLFDHFLHPYPT
DSDKHMLATQTGLTRNQVSNWFINARVRVWKPMVEEIHTLETKGLGDQTGSSIRRSEGKL
VTERPNQVNDGLHRSSISISNCGQHFNVLNMSGMSEKQDDCPGIGPSERLDEDMLWKNQE
KRSRLECHIPASMDGSLMGFVPYQRNGLEIGGIGAVSLTLGLRQNAEAAQQQQQLQQLHE
HRLRQQFGGQMIHDFVD

Transcript Sequence

Gene sequence data has not been registered.